Publications

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The following publications have cited CeNDR

How Weird is The Worm? Evolution of the Developmental Gene Toolkit in Caenorhabditis elegans
Baker EA, Woollard A,
( 2019 Sep 28 ) Journal of developmental biology

Newly Identified Nematodes from Mono Lake Exhibit Extreme Arsenic Resistance
Shih PY, Lee JS, Shinya R, Kanzaki N, Pires-daSilva A, Badroos JM, Goetz E, Sapir A, Sternberg PW,
( 2019 Oct 7 ) Current biology : CB

De novo genome sequencing and comparative stage-specific transcriptomic analysis of Dirofilaria repens
Cafarelli C, Russo G, Mathis A, Silaghi C,
( 2019 Sep 23 ) International journal for parasitology

Population Selection and Sequencing of Caenorhabditis elegans Wild Isolates Identifies a Region on Chromosome III Affecting Starvation Resistance
Webster AK, Hung A, Moore BT, Guzman R, Jordan JM, Kaplan REW, Hibshman JD, Tanny RE, Cook DE, Andersen E, Baugh LR,
( 2019 Oct 7 ) G3 (Bethesda, Md.)

A new reference genome sequence for Caenorhabditis elegans?
Howe KL,
( 2019 Sep ) Lab animal

Natural Variation and Genetic Determinants of Caenorhabditis elegans Sperm Size
Gimond C, Vielle A, Silva-Soares N, Zdraljevic S, McGrath PT, Andersen EC, Braendle C,
( 2019 Oct ) Genetics

Recompleting the Caenorhabditis elegans genome
Yoshimura J, Ichikawa K, Shoura MJ, Artiles KL, Gabdank I, Wahba L, Smith CL, Edgley ML, Rougvie AE, Fire AZ, Morishita S, Schwarz EM,
( 2019 Jun ) Genome research

Genome-wide Approaches to Investigate Anthelmintic Resistance
Doyle SR, Cotton JA,
( 2019 Apr ) Trends in parasitology

Comparative Epigenomics Reveals that RNA Polymerase II Pausing and Chromatin Domain Organization Control Nematode piRNA Biogenesis
Beltran T, Barroso C, Birkle TY, Stevens L, Schwartz HT, Sternberg PW, Fradin H, Gunsalus K, Piano F, Sharma G, Cerrato C, Ahringer J, Martínez-Pérez E, Blaxter M, Sarkies P,
( 2019 Mar 25 ) Developmental cell

Adult Influence on Juvenile Phenotypes by Stage-Specific Pheromone Production
Werner MS, Claaßen MH, Renahan T, Dardiry M, Sommer RJ,
( 2018 Dec 21 ) iScience

Shared Genomic Regions Underlie Natural Variation in Diverse Toxin Responses
Evans KS, Brady SC, Bloom JS, Tanny RE, Cook DE, Giuliani SE, Hippleheuser SW, Zamanian M, Andersen EC,
( 2018 Dec ) Genetics

An open-source platform for analyzing and sharing worm-behavior data
Javer A, Currie M, Lee CW, Hokanson J, Li K, Martineau CN, Yemini E, Grundy LJ, Li C, Ch'ng Q, Schafer WR, Nollen EAA, Kerr R, Brown AEX,
( 2018 Sep ) Nature methods

Caenorhabditis elegans as an emerging model system in environmental epigenetics
Weinhouse C, Truong L, Meyer JN, Allard P,
( 2018 Aug ) Environmental and molecular mutagenesis

Proteomic and evolutionary analyses of sperm activation identify uncharacterized genes in Caenorhabditis nematodes
Kasimatis KR, Moerdyk-Schauwecker MJ, Timmermeyer N, Phillips PC,
( 2018 Aug 7 ) BMC genomics

Linking Genomic and Metabolomic Natural Variation Uncovers Nematode Pheromone Biosynthesis
Falcke JM, Bose N, Artyukhin AB, Rödelsperger C, Markov GV, Yim JJ, Grimm D, Claassen MH, Panda O, Baccile JA, Zhang YK, Le HH, Jolic D, Schroeder FC, Sommer RJ,
( 2018 Jun 21 ) Cell chemical biology

Hawaiian Drosophila as an Evolutionary Model Clade: Days of Future Past
O'Grady P, DeSalle R,
( 2018 May ) BioEssays : news and reviews in molecular, cellular and developmental biology

A Model for Evolutionary Ecology of Disease: The Case for Caenorhabditis Nematodes and Their Natural Parasites
Gibson AK, Morran LT,
( 2017 Dec ) Journal of nematology

An Integrated Systems Genetics and Omics Toolkit to Probe Gene Function
Li H, Wang X, Rukina D, Huang Q, Lin T, Sorrentino V, Zhang H, Bou Sleiman M, Arends D, McDaid A, Luan P, Ziari N, Velázquez-Villegas LA, Gariani K, Kutalik Z, Schoonjans K, Radcliffe RA, Prins P, Morgenthaler S, Williams RW, Auwerx J,
( 2018 Jan 24 ) Cell systems

WormBase 2017: molting into a new stage
Lee RYN, Howe KL, Harris TW, Arnaboldi V, Cain S, Chan J, Chen WJ, Davis P, Gao S, Grove C, Kishore R, Muller HM, Nakamura C, Nuin P, Paulini M, Raciti D, Rodgers F, Russell M, Schindelman G, Tuli MA, Van Auken K, Wang Q, Williams G, Wright A, Yook K, Berriman M, Kersey P, Schedl T, Stein L, Sternberg PW,
( 2018 Jan 4 ) Nucleic acids research

Polygenicity and Epistasis Underlie Fitness-Proximal Traits in the Caenorhabditis elegans Multiparental Experimental Evolution (CeMEE) Panel
Noble LM, Chelo I, Guzella T, Afonso B, Riccardi DD, Ammerman P, Dayarian A, Carvalho S, Crist A, Pino-Querido A, Shraiman B, Rockman MV, Teotónio H,
( 2017 Dec ) Genetics

Why do Individuals Differ in Viral Susceptibility? A Story Told by Model Organisms
van Sluijs L, Pijlman GP, Kammenga JE,
( 2017 Sep 30 ) Viruses

Natural diversity facilitates the discovery of conserved chemotherapeutic response mechanisms
Zdraljevic S, Andersen EC,
( 2017 Dec ) Current opinion in genetics & development

MIP-MAP: High-Throughput Mapping of Caenorhabditis elegans Temperature-Sensitive Mutants via Molecular Inversion Probes
Mok CA, Au V, Thompson OA, Edgley ML, Gevirtzman L, Yochem J, Lowry J, Memar N, Wallenfang MR, Rasoloson D, Bowerman B, Schnabel R, Seydoux G, Moerman DG, Waterston RH,
( 2017 Oct ) Genetics

Natural Variation in the Distribution and Abundance of Transposable Elements Across the Caenorhabditis elegans Species
Laricchia KM, Zdraljevic S, Cook DE, Andersen EC,
( 2017 Sep 1 ) Molecular biology and evolution

Regulatory changes in two chemoreceptor genes contribute to a Caenorhabditis elegans QTL for foraging behavior
Greene JS, Dobosiewicz M, Butcher RA, McGrath PT, Bargmann CI,
( 2016 Nov 28 ) eLife

Correlations of Genotype with Climate Parameters Suggest Caenorhabditis elegans Niche Adaptations
Evans KS, Zhao Y, Brady SC, Long L, McGrath PT, Andersen EC,
( 2017 Jan 5 ) G3 (Bethesda, Md.)

Extensive intraspecies cryptic variation in an ancient embryonic gene regulatory network
Torres Cleuren YN, Ewe CK, Chipman KC, Mears ER, Wood CG, Al-Alami CEA, Alcorn MR, Turner TL, Joshi PM, Snell RG, Rothman JH,
( 2019 Aug 15 ) eLife

Fast genetic mapping of complex traits in C. elegans using millions of individuals in bulk
Burga A, Ben-David E, Lemus Vergara T, Boocock J, Kruglyak L,
( 2019 Jun 18 ) Nature communications

Long-read sequencing reveals intra-species tolerance of substantial structural variations and new subtelomere formation in C. elegans
Kim C, Kim J, Kim S, Cook DE, Evans KS, Andersen EC, Lee J,
( 2019 Jun ) Genome research

Natural variation in C. elegans arsenic toxicity is explained by differences in branched chain amino acid metabolism
Zdraljevic S, Fox BW, Strand C, Panda O, Tenjo FJ, Brady SC, Crombie TA, Doench JG, Schroeder FC, Andersen EC,
( 2019 Apr 8 ) eLife

Extreme allelic heterogeneity at a Caenorhabditis elegans beta-tubulin locus explains natural resistance to benzimidazoles
Hahnel SR, Zdraljevic S, Rodriguez BC, Zhao Y, McGrath PT, Andersen EC,
( 2018 Oct ) PLoS pathogens

Changes to social feeding behaviors are not sufficient for fitness gains of the Caenorhabditis elegans N2 reference strain
Zhao Y, Long L, Xu W, Campbell RF, Large EE, Greene JS, McGrath PT,
( 2018 Oct 17 ) eLife

From "the Worm" to "the Worms" and Back Again: The Evolutionary Developmental Biology of Nematodes
Haag ES, Fitch DHA, Delattre M,
( 2018 Oct ) Genetics

A natural variant and engineered mutation in a GPCR promote DEET resistance in C. elegans
Dennis EJ, Dobosiewicz M, Jin X, Duvall LB, Hartman PS, Bargmann CI, Vosshall LB,
( 2018 Oct ) Nature

Natural Genetic Variation in a Multigenerational Phenotype in C. elegans
Frézal L, Demoinet E, Braendle C, Miska E, Félix MA,
( 2018 Aug 20 ) Current biology : CB

The genetic basis of natural variation in a phoretic behavior
Lee D, Yang H, Kim J, Brady S, Zdraljevic S, Zamanian M, Kim H, Paik YK, Kruglyak L, Andersen EC, Lee J,
( 2017 Aug 17 ) Nature communications

Natural variation in a single amino acid substitution underlies physiological responses to topoisomerase II poisons
Zdraljevic S, Strand C, Seidel HS, Cook DE, Doench JG, Andersen EC,
( 2017 Jul ) PLoS genetics

A maternal-effect selfish genetic element in Caenorhabditis elegans
Ben-David E, Burga A, Kruglyak L,
( 2017 Jun 9 ) Science (New York, N.Y.)