NIC3

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Strains

  • NIC4
  • NIC3

Data

  • BAM / bai

    • Variation

    Soft-Filter Hard-Filter
    Variant Calls 3,947,849 2,782,492
    Homozygous reference genotype 3,860,267 2,717,364
    Heterozygous genotype 18,189 0
    Homozogyous alternative genotype 69,393 65,128
    Missing genotype call 174,144 123,643
    Singletons 1,907 794
    Data in the table above are for the reference strain.
    Summary
    • Isotype
      NIC3
    • Reference Strain
      NIC3
    • Release
      2016-04-08
    • Isolation Date
      2008-09-28
    • Latitude, Longitude
      43.3636, 5.3215
    • Elevation
      55.0 m
    • Landscape
      None
    • Substrate
      Fruit
    • Sampled By
      C. Braendle
    • Substrate Temperature (C)
    • Substrate Moisture (%)
    • Ambient Temperature (C)
    • Ambient Humidity (%)
    • Data in this table is for the reference strain.



    1.3.0